BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB026B05LP1|AL428494
(679 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1671 1303 0.0
>3x_Contig1671
Length = 12265
Score = 1303 bits (647), Expect = 0.0
Identities = 663/679 (97%)
Strand = Plus / Plus
Query: 1 agagtacgtgttagacgaattatttgaagttgaaaataaagatggtaaaatggtcgccaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10330 agagtacgtgttagacgaattatttgaagttgaaaataaagatggtaaaatggtcgccaa 10389
Query: 61 gcaaggtgaagagtttgttgaacgtagatttggcagaagtttagatttttcatatgccaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10390 gcaaggtgaagagtttgttgaacgtagatttggcagaagtttagatttttcatatgccaa 10449
Query: 121 tagagccaaattactaatcaagagacgtattgcgaggaaagtagtggacgtcgaagagga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10450 tagagccaaattactaatcaagagacgtattgcgaggaaagtagtggacgtcgaagagga 10509
Query: 181 tgatgagcaacccacacagaccaatgacgctaacagtgtcaatcataattctttgacgag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10510 tgatgagcaacccacacagaccaatgacgctaacagtgtcaatcataattctttgacgag 10569
Query: 241 agtgaatgtcatccacgaggaacaagatggtacttcgacatttgatcacacagctgactc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10570 agtgaatgtcatccacgaggaacaagatggtacttcgacatttgatcacacagctgactc 10629
Query: 301 ttctgctgaagatatagtcagagtgcagttcttaggtgctgatgatgatgacgatgacgg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10630 ttctgctgaagatatagtcagagtgcagttcttaggtgctgatgatgatgacgatgacgg 10689
Query: 361 taattytsttgatatggaccaaaactctacgattcctgcagaaccatttsatgaagttga 420
||||| | ||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 10690 taattttgttgatatggaccaaaactctacgattcctgcagaaccatttgatgaagttga 10749
Query: 421 atttsagcaaatcaatatatctccgccttcaccagaacgtgagaggacagaycctatttc 480
|||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 10750 atttgagcaaatcaatatatctccgccttcaccagaacgtgagaggacagatcctatttc 10809
Query: 481 gctgacagatgtmatasagtctcagaacgtgtcctcttcaattcatctaaaccctgaacg 540
|||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10810 gctgacagatgtaatagagtctcagaacgtgtcctcttcaattcatctaaaccctgaacg 10869
Query: 541 ggacgtgtttyystycccaagtsgtatggcttcsattttyhctgcacatagattattgtt 600
|||||||||| | ||||||| |||||||||| ||||| |||||||||||||||||||
Sbjct: 10870 ggacgtgtttttgttcccaagtggtatggcttcgatttttactgcacatagattattgtt 10929
Query: 601 agagcttgattccaagcgagttaaacgcaataacgttmatacctccgcaaatactccgat 660
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 10930 agagcttgattccaagcgagttaaacgcaataacgttaatacctccgcaaatactccgat 10989
Query: 661 tggatacggtggtgcgtat 679
|||||||||||||||||||
Sbjct: 10990 tggatacggtggtgcgtat 11008
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.40 0.714 1.32
Gapped
Lambda K H
1.40 0.714 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4659
Number of Sequences: 1807
Number of extensions: 4659
Number of successful extensions: 261
Number of sequences better than 1.0e-20: 1
length of query: 679
length of database: 10,358,551
effective HSP length: 16
effective length of query: 663
effective length of database: 10,329,639
effective search space: 6848550657
effective search space used: 6848550657
T: 0
A: 40
X1: 5 (10.1 bits)
X2: 14 (28.2 bits)
S1: 12 (24.6 bits)
S2: 49 (99.2 bits)